replaced atomics with a vec-wide lock, now 2x slower than before

Cargo.lock

@@ -79,12 +79,6 @@ version = "3.19.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "46c5e41b57b8bba42a04676d81cb89e9ee8e859a1a66f80a5a72e1cb76b34d43"
 
-[[package]]
-name = "byteorder"
-version = "1.5.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "1fd0f2584146f6f2ef48085050886acf353beff7305ebd1ae69500e27c67f64b"
-
 [[package]]
 name = "cast"
 version = "0.3.0"
@@ -250,25 +244,6 @@ dependencies = [
  "zerocopy",
 ]
 
-[[package]]
-name = "hash32"
-version = "0.3.1"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "47d60b12902ba28e2730cd37e95b8c9223af2808df9e902d4df49588d1470606"
-dependencies = [
- "byteorder",
-]
-
-[[package]]
-name = "heapless"
-version = "0.8.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "0bfb9eb618601c89945a70e254898da93b13be0388091d42117462b265bb3fad"
-dependencies = [
- "hash32",
- "stable_deref_trait",
-]
-
 [[package]]
 name = "is_terminal_polyfill"
 version = "1.70.1"
@@ -306,12 +281,6 @@ version = "0.2.177"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "2874a2af47a2325c2001a6e6fad9b16a53b802102b528163885171cf92b15976"
 
-[[package]]
-name = "libm"
-version = "0.2.15"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "f9fbbcab51052fe104eb5e5d351cf728d30a5be1fe14d9be8a3b097481fb97de"
-
 [[package]]
 name = "log"
 version = "0.4.28"
@@ -331,7 +300,6 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "071dfc062690e90b734c0b2273ce72ad0ffa95f0c74596bc250dcfd960262841"
 dependencies = [
  "autocfg",
- "libm",
 ]
 
 [[package]]
@@ -500,17 +468,6 @@ version = "0.8.8"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "7a2d987857b319362043e95f5353c0535c1f58eec5336fdfcf626430af7def58"
 
-[[package]]
-name = "rstar"
-version = "0.12.2"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "421400d13ccfd26dfa5858199c30a5d76f9c54e0dba7575273025b43c5175dbb"
-dependencies = [
- "heapless",
- "num-traits",
- "smallvec",
-]
-
 [[package]]
 name = "rustversion"
 version = "1.0.22"
@@ -576,28 +533,15 @@ dependencies = [
 ]
 
 [[package]]
-name = "smallvec"
+name = "spacedog"
-version = "1.15.1"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "67b1b7a3b5fe4f1376887184045fcf45c69e92af734b7aaddc05fb777b6fbd03"
-
-[[package]]
-name = "spacebench"
 version = "0.1.0"
 dependencies = [
  "clap",
  "criterion",
  "rand",
  "rand_hc",
- "rstar",
 ]
 
-[[package]]
-name = "stable_deref_trait"
-version = "1.2.1"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "6ce2be8dc25455e1f91df71bfa12ad37d7af1092ae736f3a6cd0e37bc7810596"
-
 [[package]]
 name = "strsim"
 version = "0.11.1"

Cargo.toml

@@ -12,3 +12,7 @@ rand_hc = "0.4.0"
 [[bench]]
 name = "benchmarks"
 harness = false
+
+[dependencies]
+rand = "0.9.2"
+rand_hc = "0.4.0"

benches/benchmarks.rs

@@ -1,134 +1,4 @@
-use std::{
+use spacedog::*;
-    sync::{
-        atomic::{AtomicU64, AtomicUsize, Ordering::Relaxed},
-        Arc, RwLock,
-    },
-    thread,
-};
-
-struct Point2d {
-    x: f64,
-    y: f64,
-}
-
-#[derive(Debug, Default, Clone, Copy)]
-struct PVal {
-    point: usize,
-    val: f64,
-}
-
-impl PartialEq for PVal {
-    fn eq(&self, other: &Self) -> bool {
-        self.val == other.val
-    }
-}
-
-impl Eq for PVal {}
-
-impl PartialOrd for PVal {
-    fn partial_cmp(&self, other: &Self) -> Option<std::cmp::Ordering> {
-        Some(self.cmp(other))
-    }
-}
-
-impl Ord for PVal {
-    fn cmp(&self, other: &Self) -> std::cmp::Ordering {
-        self.val.partial_cmp(&other.val).unwrap()
-    }
-}
-
-struct Spindex2d {
-    xpoints: Arc<Vec<AtomicUsize>>,
-    ypoints: Arc<Vec<AtomicUsize>>,
-    xs: Arc<RwLock<Vec<PVal>>>,
-    ys: Arc<RwLock<Vec<PVal>>>,
-}
-
-impl Spindex2d {
-    pub fn new(points: &[Point2d]) -> Self {
-        let mut xpoints = Vec::with_capacity(points.len());
-        let mut ypoints = Vec::with_capacity(points.len());
-        let mut xs = Vec::with_capacity(points.len());
-        let mut ys = Vec::with_capacity(points.len());
-        for (i, point) in points.iter().enumerate() {
-            let x = PVal {
-                point: i,
-                val: point.x,
-            };
-            xs.push(x);
-            let y = PVal {
-                point: i,
-                val: point.y,
-            };
-            ys.push(y);
-
-            xpoints.push(AtomicUsize::new(i));
-            ypoints.push(AtomicUsize::new(i));
-        }
-
-        let index = Self {
-            xpoints: xpoints.into(),
-            ypoints: ypoints.into(),
-            xs: Arc::new(RwLock::new(xs)),
-            ys: Arc::new(RwLock::new(ys)),
-        };
-
-        index.sort();
-
-        index
-    }
-
-    /// This method assumes that the points have the same cardinality and order as the points used
-    /// when constructing this index. May panic if the updated points argument is longer than the
-    /// original points.
-    pub fn update(&self, points: &[Point2d]) {
-        let mut xs = self.xs.write().unwrap();
-        let mut ys = self.ys.write().unwrap();
-        for (i, point) in points.iter().enumerate() {
-            let xi = self.xpoints[i].load(Relaxed);
-            let yi = self.ypoints[i].load(Relaxed);
-            let x = PVal {
-                point: i,
-                val: point.x,
-            };
-            xs[xi] = x;
-
-            let y = PVal {
-                point: i,
-                val: point.y,
-            };
-            ys[yi] = y;
-        }
-        self.sort();
-    }
-
-    fn sort(&self) {
-        let xs = self.xs.clone();
-        let points = self.xpoints.clone();
-        let xhandle = thread::spawn(move || {
-            let mut xs = xs.write().unwrap();
-            xs.sort_unstable();
-            for (i, x) in xs.iter().enumerate() {
-                let p = x.point;
-                points[p].store(i, Relaxed);
-            }
-        });
-
-        let ys = self.ys.clone();
-        let points = self.ypoints.clone();
-        let yhandle = thread::spawn(move || {
-            let mut ys = ys.write().unwrap();
-            ys.sort_unstable();
-            for (i, y) in ys.iter().enumerate() {
-                let p = y.point;
-                points[p].store(i, Relaxed);
-            }
-        });
-
-        xhandle.join().unwrap();
-        yhandle.join().unwrap();
-    }
-}
 
 use rand::{Rng, SeedableRng};
 use rand_hc::Hc128Rng;
@@ -159,7 +29,7 @@ fn new_index(c: &mut Criterion) {
     });
 }
 
-fn update_positions(c: &mut Criterion) {
+fn _update_positions(c: &mut Criterion) {
     c.bench_function("update positions", move |b| {
         let points: Vec<_> = create_random_points(DEFAULT_NUM_POINTS, SEED_1)
             .into_iter()

src/lib.rs

@@ -0,0 +1,139 @@
+use std::{
+    sync::{
+        atomic::{AtomicUsize, Ordering::Relaxed},
+        Arc, RwLock,
+    },
+    thread,
+};
+
+#[derive(Debug, Default, Clone, Copy, PartialEq, PartialOrd)]
+pub struct Point2d {
+    pub x: f64,
+    pub y: f64,
+}
+
+#[derive(Debug, Default, Clone, Copy)]
+pub struct PVal {
+    point: usize,
+    val: f64,
+}
+
+impl PartialEq for PVal {
+    fn eq(&self, other: &Self) -> bool {
+        self.val == other.val
+    }
+}
+
+impl Eq for PVal {}
+
+impl PartialOrd for PVal {
+    fn partial_cmp(&self, other: &Self) -> Option<std::cmp::Ordering> {
+        Some(self.cmp(other))
+    }
+}
+
+impl Ord for PVal {
+    fn cmp(&self, other: &Self) -> std::cmp::Ordering {
+        self.val.partial_cmp(&other.val).unwrap()
+    }
+}
+
+#[derive(Debug, Default, Clone)]
+pub struct Spindex2d {
+    xpoints: Arc<RwLock<Vec<usize>>>,
+    ypoints: Arc<RwLock<Vec<usize>>>,
+    xs: Arc<RwLock<Vec<PVal>>>,
+    ys: Arc<RwLock<Vec<PVal>>>,
+}
+
+impl Spindex2d {
+    pub fn new(points: &[Point2d]) -> Self {
+        let mut xpoints = Vec::with_capacity(points.len());
+        let mut ypoints = Vec::with_capacity(points.len());
+        let mut xs = Vec::with_capacity(points.len());
+        let mut ys = Vec::with_capacity(points.len());
+        for (i, point) in points.iter().enumerate() {
+            let x = PVal {
+                point: i,
+                val: point.x,
+            };
+            xs.push(x);
+            let y = PVal {
+                point: i,
+                val: point.y,
+            };
+            ys.push(y);
+
+            xpoints.push(i);
+            ypoints.push(i);
+        }
+
+        let index = Self {
+            xpoints: Arc::new(RwLock::new(xpoints)),
+            ypoints: Arc::new(RwLock::new(ypoints)),
+            xs: Arc::new(RwLock::new(xs)),
+            ys: Arc::new(RwLock::new(ys)),
+        };
+
+        index.sort();
+
+        index
+    }
+
+    /// This method assumes that the points have the same cardinality and order as the points used
+    /// when constructing this index. May panic if the updated points argument is longer than the
+    /// original points.
+    pub fn update(&self, points: &[Point2d]) {
+        let mut xs = self.xs.write().unwrap();
+        let mut ys = self.ys.write().unwrap();
+        let xpoints = self.xpoints.read().unwrap();
+        let ypoints = self.ypoints.read().unwrap();
+        for (i, point) in points.iter().enumerate() {
+            println!("hello: {i}");
+            let xi = xpoints[i];
+            let yi = ypoints[i];
+            let x = PVal {
+                point: i,
+                val: point.x,
+            };
+            xs[xi] = x;
+
+            let y = PVal {
+                point: i,
+                val: point.y,
+            };
+            ys[yi] = y;
+        }
+        println!("done updating points");
+        self.sort();
+    }
+
+    fn sort(&self) {
+        let xs = self.xs.clone();
+        let points = self.xpoints.clone();
+        let xhandle = thread::spawn(move || {
+            let mut xs = xs.write().unwrap();
+            xs.sort_unstable();
+            let mut points = points.write().unwrap();
+            for (i, x) in xs.iter().enumerate() {
+                let p = x.point;
+                points[p] = i;
+            }
+        });
+
+        let ys = self.ys.clone();
+        let points = self.ypoints.clone();
+        let yhandle = thread::spawn(move || {
+            let mut ys = ys.write().unwrap();
+            ys.sort_unstable();
+            let mut points = points.write().unwrap();
+            for (i, y) in ys.iter().enumerate() {
+                let p = y.point;
+                points[p] = i;
+            }
+        });
+
+        xhandle.join().unwrap();
+        yhandle.join().unwrap();
+    }
+}

src/main.rs

@@ -0,0 +1,43 @@
+use rand::{Rng, SeedableRng};
+use rand_hc::Hc128Rng;
+
+use spacedog::*;
+
+fn create_random_points(num_points: usize, seed: &[u8; 32]) -> Vec<[f64; 2]> {
+    let mut rng = Hc128Rng::from_seed(*seed);
+    (0..num_points).map(|_| rng.random()).collect()
+}
+
+const SEED_1: &[u8; 32] = b"Gv0aHMtHkBGsUXNspGU9fLRuCWkZWHZx";
+// const SEED_2: &[u8; 32] = b"km7DO4GeaFZfTcDXVpnO7ZJlgUY7hZiS";
+
+const DEFAULT_NUM_POINTS: usize = 1_000_000;
+
+fn main() {
+    let points: Vec<_> = create_random_points(DEFAULT_NUM_POINTS, SEED_1)
+        .into_iter()
+        .map(|[x, y]| Point2d { x, y })
+        .collect();
+
+    let mut rng = Hc128Rng::from_seed(*SEED_1);
+
+    let jitters: Vec<_> = points
+        .iter()
+        .map(|p| {
+            let x = p.x + rng.random_range(-5.0..=5.0);
+            let y = p.y + rng.random_range(-5.0..=5.0);
+            Point2d { x, y }
+        })
+        .collect();
+
+    let index = Spindex2d::new(&points);
+
+    for round in 0..100 {
+        dbg!(round);
+        if round % 2 == 0 {
+            index.update(&jitters);
+        } else {
+            index.update(&points);
+        }
+    }
+}